Workshop - 08/2022
Latest Events
Comprehensive workshop on
"Basics to Advanced Bioinformatics, Genomics
and NGS data analytics"


August 13 - 31, 2022

This workshop is designed to provide hands-on training of different modules of Basic Bioinformatics (Linux System, Python & R), Genomics, Network Biology, Next Generation Sequencing (NGS) data processing data analysis; and Genome Assembly and annotations & Gene Expression Analysis with NGS datasets. This event is specially designed for the beginners in the field, and very useful for the students ans researchers already working in the field.  

Who can participate: Students (B.Sc./B.Tech/M.Sc./M.Tech/MBBS), Research Fellows (Ph.D. students), Researchers (JRF/SRF/RA), Faculty, Scientists, and Company Personals. 

Workshop Logistics 

 

Last date of registration: August 11, 2022

Fee: Rs. 850/- for Indian Participants, $20 (USD) for International Participants.

Prerequisite for the workshop

  • Computer/Laptop with stable internet connection, and MIC.

  • Basic knowledge of molecular biology.

Certification and other highlights

  • Participants must have access to the laptop/desktop with a stable internet connection. 

  • Participants successfully completing the training will be provided with E-certificate.

  • The entire training will be online and interactive (16-20 Hours).

  • We will provide the full recordings of all the training sessions. 

  • We will provide the link (e.g. Webex) to join the training sessions, one day before the event.

Help and Support 

support@nextgenhelper.com

Workshop Timings (Indian Standard Time e.g. IST)

August 13, 2022 (07:00 - 08:00 PM): Basics of Python.

  • Introduction to Python and code editors

  • Basic programming concepts

  • Conditionals and loops

August 14, 2022 (07:00 - 08:00 PM): Data handling in Python.

  • File handling in Python

  • Coding and data handling

August 15, 2022: You have to Practice, No live session.

August 16, 2022 (07:00 - 08:00 PM): Learn 'R' programming for beginners

  • Basics of 'R' and 'R studio'.

  • Installation of 'R' and 'R Studio'

August 17, 2022 (07:00 - 08:00 PM): File and data handling in R with R-Studio

  • Basic data/file handling in R.

  • Graph preparation in R with R studio

August 18, 2022: You have to Practice, No live session.

August 19, 2022 (07:00 - 08:00 PM): How to setup your linux system to start bioinformatics work?

  • Basics of Linux System

  • Installation of Linux system

August 20, 2022 (07:00 - 08:00 PM): Basic Linux commands

  • Basics linux commands to perform different operations

  • Handling of files/data with shell commands

 

August 21, 2022: You have to Practice, No live session.

August 22, 2022 (07:00 - 08:00 PM): Quality Control of Next Generation Sequencing (NGS) datasets

  • Basics of NGS datasets, generation and Quality Score.

  • Data handling and Filtering of NGS datasets, trimming etc.

  • Training of tools to filter the NGS datasets.

August 23, 2022 (07:00 - 08:00 PM): Gene Whole genome assembly with NGS datasets

  • Basics of Whole genome assembly

  • Demonstration of whole genome assembly with short reads

  • Quality assignment of whole genome assembly

August 24, 2022 (07:00 - 08:00 PM): Whole Genome Annotations, and Gene annotations

  • Gene prediction

  • Whole genome annotation with PROKKA pipeline for prokaryotic genomes

  • Assigning the functions to the predicted genes

August 25, 2022 (07:00 - 08:00 PM): NGS Data analysis with Galaxy tool 

  • Basics of Galaxy tool

  • NGS data import/export, and analysis in GALAXY

August 26, 2022: You have to Practice, No live session.

August 27, 2022 (07:00 - 08:00 PM): RNA-Seq data analysis -I

August 28, 2022 (07:00 - 08:00 PM): RNA-Seq data analysis -II

August 29, 2022: You have to Practice, No live session.

August 30, 2022 (07:00 - 08:00 PM): Network Biology -I

  • Basics of Network Analysis

  • Network constructions

August 31, 2022 (07:00 - 08:00 PM): Network Biology -II

  • Network Data analysis

  • Cystoscape usages

Scientists for this Workshop

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Dr. Shruti Kapoor

PhD. Postdoctoral Scientist,

University of Alabama,
Birmingham, AL, USA

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Dr. Manish Datt

Manish Datt

Bioinformatics Researcher and Educator, New Delhi

India

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Dr. Madhumita

Postdoctoral research fellow, UNIKA-T, Germany

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Dr. Vipin Singh

Associate Professor, Biotechnology, Chandigarh University, India

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Dr. Surendra Vikram

PhD, CSIR-IMTECH,

CEO- Bionomics Research Lab, India

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Dr. Adarsh Kumar

PhD, CSIR-IMTECH, India.

Postdoc fellow, Florida State University College of Medicine, USA

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Internship Registration & Payment

After this form, please pay the fee to complete the registration process !!