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Hands-on workshop on
"Genomics, Ensembl Genome Browser and Biomart"
October 03-11, 2022

     Ensembl Genome Browser                     Nextgenhelper                     European Bioinformatics Institute

        https://www.ensembl.org           https://www.nextgenhelper.com                  https://www.ebi.ac.uk/

We are organising this workshop of high quality, for the participants interested in the genomics, bioinformatics, and genome annotations. In this workshop, different trainers from European Bioinformatics Institute (EMBL-EBI) will provide the hands-on training sessions of 'Ensembl Genome browser, and 'BioMart'. This workshop will be equally useful for the researchers working with any domain of life (e.g. microbes, animals, fungus, and plants).  

 

Who can participate: Students (B.Sc./B.Tech/M.Sc./M.Tech), Research Fellows, PhD Student, Faculty, Scientists, and Company Personals. 

Workshop Schedule

Date: October 03-11, 2022

Time: 6:30 PM - 8:00 PM Indian Standard time (IST)

 

Registration

Last date of registration: October 01, 2022

Registration Fee: Rs. 500/- Indian Participants, $15 (USD) for International Participants.

 

Certification

We will provide E-certificates to all the registered participants, issued by European Bioinformatics Institute (EMBL-EBI), European Molecular Biology Laboratory, Wellcome Genome Campus, Cambridge, UK.

Highlights

  • The entire workshop will be online and interactive.

  • We will provide the link (e.g. Webex) to join the workshop a day before the event.

  • Participants do not need to install any software package/tool for this workshop. No programming or knowledge of Bioinformatics required.

  • Workshop material will be available for the registered participants. 

  • All the training sessions will be delivered by EMBL-EBI project leaders (resource persons). 

Prerequisites

  • Participants must have access to the laptop/desktop with a stable internet connection.

  • Elementary knowledge of molecular biology/genetics.

Help and Support

support@nextgenhelper.com

Pre-course survey (Please fill this form before registration)

Will be updates soon...

Workshop Material

Will be updated soon...

Day 1, October 03, 2022

06:30 - 08:00 PM: Introduction to Ensembl and browsing regions with exercises 

 

Day 2, October 04, 2022

06:30 - 08:00 PM: Genebuild: how are Ensembl gene and transcripts predictions made?

October 05, 2022: No live session, you have to practice

Day 3, October 06, 2022

06:30 - 8:00 PM: Variation: SNPs and other polymorphisms, haplotypes, linkage disequilibrium, structural variants like CNVs

Day 4, October 07, 2022

06:30 - 8:00 PM: Comparative genomics and proteomics: orthologues, protein families, whole genome alignments and syntenic regions

October 08, 2022: No live session, you have to practice

October 09, 2022: No live session, you have to practice

Day 5, October 10, 2022

06:30 - 08:00 PM: Regulation: Sequences that may be involved in gene regulation, and integration of ENCODE data

Day 6, October 11, 2022

06:30 - 08:00 PM: Data export with BioMart: retrieving genomic information using a web interface (no
programming required)

Resource persons (trainers) of the Workshop
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Dr. Aleena Mushtaq

Ensembl Outreach Officer -

European Bioinformatics Institute (EMBL-EBI),

Wellcome Genome Campus

Hinxton, CambridgeUK 

More..

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Dr. Louisse Mirabueno

Ensembl Outreach Officer -

European Bioinformatics Institute (EMBL-EBI), UK 

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Dr. Benjamin Moore

Ensembl Outreach Project Manager - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome CampusUK 

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Payment Options for Workshop
Indian Participants
International Participants