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Hands-on workshop on
"Ensembl Genome Browser, Bioinformatics, and Genomics"
August 19 - 31, 2024

     Ensembl Genome Browser                     Nextgenhelper                     European Bioinformatics Institute

        https://www.ensembl.org           https://www.nextgenhelper.com                  https://www.ebi.ac.uk/

We are organising this high quality, hands-on workshop to provide the training of Bioinformatics, Genomics, and Ensembl Genome Browser usages. In addition to this, we have included some sessions of Network and Structural Biology, with the training of Cytoscape and Pymol tools.

This workshop will be equally useful for the researchers working with any domain of life (e.g. microbes, animals, fungus, and plants) Its a very good opportunity to gain hands-on training with the trainers of international reputation. 

 

Who can participate: Students (B.Sc./B.Tech/M.Sc./M.Tech), Research Fellows, PhD Student, Faculty, Scientists, and Company Personals.

Workshop Schedule

Date: August 19 - 31, 2024

Time: 07:00 - 08:00 PM IST (Indian Standard Time) 

 

Registration

Last date of registration: August 17, 2024

Registration Fee: Rs. 800/- Indian Participants, $20 (USD) for International Participants.

 

Certification

We will provide e-certificates to all the registered participants, duly signed by EMBL-EBI Project Leader.

 

Highlights

  • The entire workshop will be online, hands-on and interactive.

  • We will provide the link (e.g. Webex) to join the workshop one day before the event.

  • Workshop material will be available for the registered participants one week before the starting of the event.

  • We will provide the video recordings of all the sessions. 

Prerequisites

  • Participants must have access to the laptop/desktop with a stable internet connection.

  • No need of any knowledge of Bioinformatics, Linux etc. We will start from basics only.

Help and Support 

support@nextgenhelper.com

Pre-course Survey

Please fill the pre-cource survey for Ensembl Workshop
 

Workshop Material 

Click here

August 19, 2024

06:30 - 08:00 PM: Introduction to Ensembl Plants: Origin, goals and organisation of the Ensembl project

August 20, 2024

06:30 - 08:00 PM: Genes and Transcripts: Visualising and exporting data for plant genes and transcripts

 

August 21, 2024

06:30 - 08:00 PM: Variation: SNPs and other polymorphisms, structural variants

 

August 22, 2024

06:30 - 08:00 PM: Comparative genomics and proteomics: Orthologues, whole genome alignments and syntenic regions

August 23, 2024

06:30 - 08:00 PM: Data export with BioMart: Retrieving genomic information using a web interface (no programming required).

Resource persons (trainers) of the Workshop
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Dr. Aleena Mushtaq

Ensembl Outreach Officer -

European Bioinformatics Institute (EMBL-EBI),

Wellcome Genome Campus

Hinxton, CambridgeUK 

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Dr. Michal Szpak

Ensembl Outreach Officer -

European Bioinformatics Institute (EMBL-EBI),

Wellcome Genome Campus

Hinxton, CambridgeUK 

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Dr. Manish Datt

Bioinformatics Researcher and Educator, New Delhi

India

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Dr. Madhumita

Postdoctoral research fellow, UNIKA-T, Germany 

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Dr. Benjamin Moore

Ensembl Outreach Project Manager - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome CampusUK 

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Dr. Surendra Vikram

CEO - Bionomics Research Lab, India

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Dr. Adarsh Kumar

PhD (CSIR-IMTECH, Chandigarh), Postdoctoral Research Fellow (University of Florida, 2018-2021)

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